Follow our journey.

  • Spatial host-microbiome sequencing.

    Nature Biotechnology. 2023 Nov 20.

  • In silico tissue generation and power analysis for spatial omics

    Nature Methods. 2023 March 2.

  • Nanobody-tethered transposition allows for multifactorial chromatin profiling at single-cell resolution.

    Nature Biotechnology. 2022 Dec 19.

  • PySeq2500: An open source toolkit for repurposing HiSeq 2500 sequencing systems as versatile fluidics and imaging platforms.

    Scientific Reports. 2022 Mar. 24.

  • Three-dimensional spatial transcriptomics uncovers cell type localizations in the human rheumatoid arthritis synovium.

    Nature Communications Biology. 2022 February 11.

  • Direct detection of RNA modifications and structure using single molecule nanopore sequencing.

    Cell Genomics. 2022 Feb 9.

  • SM-Omics is an automated platform for high-throughput spatial multi-omics.

    Nature Communications. 2022 February 10.

  • Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells.

    Nature Biotechnology. 2021 June 3.

  • Integrated analysis of multimodal single-cell data.

    Cell. 2021 May 31.

  • Profiling the genetic determinants of chromatin accessibility with scalable single-cell CRISPR screens.

    Nature Biotechnology. 2021 Apr. 29.

  • Characterizing the molecular regulation of inhibitory immune checkpoints with multimodal single-cell screens.

    Nature Genetics. 2021 Mar. 1

  • High throughput pMHC-I tetramer library production using chaperone-mediated peptide exchange.

    Nature Communications. 2020 Apr. 20.

  • Comprehensive Integration of Single-Cell Data.

    Cell. 2019 June 6.

  • Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells.

    Nature Methods. 2019 Apr 22.

  • Somatic mutations and cell identity linked by Genotyping of Transcriptomes.

    Nature. 2019 July 3.

  • High-throughput magnetic particle washing in nanoliter droplets using serial injection and splitting.

    Micro and Nano Systems Letters. 2018 June 21.

  • YES1 amplification is a mechanism of acquired resistance to EGFR inhibitors identified by transposon mutagenesis and clinical genomics.

    Proc Natl Acad Sci U S A. 2018 June 6.

  • Single-cell RNA-seq of rheumatoid arthritis synovial tissue using low-cost microfluidic instrumentation.

    Nature Communications. 2018 Feb. 23.

  • Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics.

    Genome Biology. 2018 Dec. 19.

  • High-definition spatial transcriptomics for in situ tissue profiling.

    Nature Methods. 2019 Sept. 9.

  • Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis.

    Science. 2019 Apr. 5.

  • Large-scale simultaneous measurement of epitopes and transcriptomes in single cells.

    Nature Methods. 2017 July 31.

  • Massive and parallel expression profiling using microarrayed single-cell sequencing.

    Nature Communications. 2016 Oct. 14.

  • Visualization and analysis of gene expression in tissue sections by spatial transcriptomics.

    Science. 2016 Jul. 1.